SeqAn3
The Modern C++ library for sequence analysis.
detail.hpp
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// -----------------------------------------------------------------------------------------------------
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// Copyright (c) 2006-2019, Knut Reinert & Freie Universität Berlin
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// Copyright (c) 2016-2019, Knut Reinert & MPI für molekulare Genetik
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// This file may be used, modified and/or redistributed under the terms of the 3-clause BSD-License
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// shipped with this file and also available at: https://github.com/seqan/seqan3/blob/master/LICENSE.md
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// -----------------------------------------------------------------------------------------------------
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#pragma once
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#include <
seqan3/core/algorithm/configuration_utility.hpp
>
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namespace
seqan3::detail
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{
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// ----------------------------------------------------------------------------
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// search_config_id
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// ----------------------------------------------------------------------------
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enum struct
search_config_id : uint8_t
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{
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max_error,
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max_error_rate,
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output,
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mode,
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// ATTENTION: Must always be the last item; will be used to determine the number of ids.
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SIZE
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};
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// ----------------------------------------------------------------------------
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// search_config_validation_matrix
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// ----------------------------------------------------------------------------
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template
<>
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inline
constexpr
std::array<std::array<bool, static_cast<uint8_t>
(search_config_id::SIZE)>,
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static_cast<uint8_t>(search_config_id::SIZE)> compatibility_table<search_config_id> =
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{
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{
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// max_error, max_error_rate, output, mode
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{ 0, 0, 1, 1 },
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{ 0, 0, 1, 1 },
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{ 1, 1, 0, 1 },
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{ 1, 1, 1, 0 }
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}
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};
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}
// namespace seqan3::detail
configuration_utility.hpp
Provides functionality to access get function by enum values.
seqan3::detail
Definition:
aligned_sequence_concept.hpp:35
std::array
seqan3
search
algorithm
configuration
detail.hpp
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